Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932706.1_cds_XP_016479149.1_70720
CDS Infomation

[gene=LOC107800486] [db_xref=GeneID:107800486] [protein=mitogen-activated protein kinase kinase kinase NPK1-like] [protein_id=XP_016479149.1] [location=26275..27594] [gbkey=CDS]
Sequence

ATGGGGGAAGAACCAGATTTTGTGCAACAAGGGATGGAAAGTAAGAAAAAAGTTGAAGTT
CAAGGGAAGAAGATGGAGCTAAAGAGTAATGTAAACGAATTTGGAGATGGAGTTTCATGG
TATAGAGGAGCAATGCTTGGGAAAGGAAGTTTTGGGCATGTTTATGTGGCTAAATTGAAG
AACTCCAGATCAAAAAATGGCTACTTACCATCAGTTATGGCTGTGAAATCCGCTGAGGTT
TCTATTTCTGGTTCAATTCAGAAGGAAAGAGAGGTTCTCAATAACATCAAGGGTTGTCCG
TACATAATTCGATGCTATGGCGATGAAACTACAACTGATGAGAATGGTATGATGGTTTAT
AACTTGTTGCTTGAGTATGGTTCTGGTGGAACCCTAGCTGAGAGGATCAAGAAATTAGGG
AACAAAGGATTGCCTGAATTTGAGGTAAGGTCTTATACTAGGTCTATGCTTAGAGGGTTA
AATTATATTCACACGATTGGTTATGTTCATTGTGATATGAAACCTGATAATATCTTGCTT
GTGTTGAATTCTAGTAAAGGAAGTAATGAATTTAGGGCAAAAATTGGTGATTTTGGATTG
GCGAAAAGAGAAAATCAGAGTAAAAAGAGGAGATTGGAGACTTATTGGAGGGGTACTCCG
ATGTATTTGTCACCTGAAGCTGTAGCTGATAGTGTACAAGAGTCTGCCGCGGATATTTGG
GCTCTTGGGTGTATTGTGCTTGAGATGTTAACGGGGAAACCTCCGTGGAATCAGAAGGAA
GATATGGATGCTGAGGATGTACTTAAAAAGATTGGGGAAGGGCATGAATTGCCTAAAATT
CCAGGCGAATTGTCTAAGGAAGCGAAAGATTTCCTAAAAGGTTGTTTTGTGAGGAAGCCT
AGGTATAGATGGACTGCTGAAATGCTGCTAAATCATCCATTTGTAGAGGGTTTAAGTGAT
GATGATGGTGTGGAAGAATCAGATGAGGTTGAAGATATAAATGAAATTGGTTCTATGCTC
TTGGTTACTGAGACAGACGATGAATTTTCCTGTTTTTCAGAAGATTGGAGCTGCGTATCT
GAAGGGGACTCTGTTGATTACTGGTCGGAGGAAGATTCAGAGGTTATGGAGGATGAAACG
GTCTCTTATTTTGTGGAAGAAGGGTTATTAAAAGTAGAAGAAAGGATAAACGTTACAAGC
TCCAGCATTGATAGTGGTTATAATTGTATGATTGATAAATCAATGCAAGTACCTTCGAGG
AGTCCATCAAATAATTCGCCGAAATGTCCATTAAAATTTACCATTCCTGCAGGTGTCTAG

Peptide Sequence

PEP ID

XP_016479149.1
PEP Infomation

PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Nicotiana tabacum]
Sequence

MGEEPDFVQQGMESKKKVEVQGKKMELKSNVNEFGDGVSWYRGAMLGKGSFGHVYVAKLK
NSRSKNGYLPSVMAVKSAEVSISGSIQKEREVLNNIKGCPYIIRCYGDETTTDENGMMVY
NLLLEYGSGGTLAERIKKLGNKGLPEFEVRSYTRSMLRGLNYIHTIGYVHCDMKPDNILL
VLNSSKGSNEFRAKIGDFGLAKRENQSKKRRLETYWRGTPMYLSPEAVADSVQESAADIW
ALGCIVLEMLTGKPPWNQKEDMDAEDVLKKIGEGHELPKIPGELSKEAKDFLKGCFVRKP
RYRWTAEMLLNHPFVEGLSDDDGVEESDEVEDINEIGSMLLVTETDDEFSCFSEDWSCVS
EGDSVDYWSEEDSEVMEDETVSYFVEEGLLKVEERINVTSSSIDSGYNCMIDKSMQVPSR
SPSNNSPKCPLKFTIPAGV

Transcript Sequence

Gene sequence data has not been registered.